EST2uni download
SVN
You can obtain the latest code with the command svn checkout svn://bioinf.comav.upv.es/svn/est2uni.
Version 0.27 2007-10-24
This is the version tested in our daily work, but for sure is not bug free. We would appreciate any report, including bugs, suggestions or greetings. We would like to know about you.
Several bugs fixed.
Changelog:
Version 0.26 2007-05-30
This is the version tested in our daily work, but for sure is not bug free. We would appreciate any report, including bugs, suggestions or greetings. We would like to know about you.
Microarray normalized data support added.
Now indels can be scanned by the SNP module.
web_estpipe renamed to est2uni.
Several bugs fixed.
Changelog:
Version 0.25 2006-10-27
EST2uni 0.25
est_pipe.pl renamed as est2uni.
User documentation added.
Example data included.
Simplified configuration file.
PHP5 compatibility fixes.
CSS restructured.
microarray clone selection improved.
Added annotation module for contamination detection.
Improved statistics for unigenes, pSSRs, pSNPs, etc.
Several bugs fixed.
Changelog:
Version 0.24 2006-07-05
EST2uni 0.24
Added support to manual EST-marker relationships.
CSS is now much more structured and clean.
Common printing infrastructure enabled for all PHP printing classes.
Added support for on going works by the researchers in the project.
Improved parallel version performance.
Web interface for user administration added.
Several bugs fixed.
Changelog:
Version 0.23
EST2uni 0.23 download
Fully parallel operation using Condor enabled.
Complete blasts results are stored in the database and displayed in the web interface.
External babelomics analysis enabled.
CLI interface added.
Putative SSR and SNP naming schema changed.
Database views added to speed up the web interface.
Several bugs fixed.
Changelog:
EST2uni 0.22
Several bugs fixed.
Libraries statistics web page added.
Support added for orthologs and synonymous sequences.
Support for queries with uploaded list of genes.
Given a query it's now possible to download the sequences, the orthologs or the synonymous.
Changelog:
Version 0.21
EST2uni 0.21
Several bugs fixed.
Putative SNP information is split in 2 tables.
Putative SNP functions are gathered in its own module.
Putative SNP can be searched among particular accessions.
Unigenes from particular libraries can be searched.
Formatted Blast databases are now in the project directories, not in the estpipe directory.
Changelog:
Version 0.2
EST2uni 0.2
Several bugs fixed.
Compatibility with mysql 3.0 added.
EST selection to build a microarray added.
Complete CDS estimation added.
Complete reworked query form.
Superunigene analysis joins similar unigenes in clusters.
Added support for color images of the contigs.
Changelog:
Version 0.1b
Deprecated. 1-12-2005
EST2uni 0.1b
Registration
You are not obliged to register your copy of EST2uni, just do it if you want receive an email when a new version is released.